1 |
miRBasehttp://www.mirbase.org/ |
A major microRNA repository comprising of microRNA sequences and annotation obtained from published literature wherein both precursor and mature sequences can be retrieved from the database. |
| Kozomara A, Griffiths-Jones S. miRBase: integrating microRNA annotation and
deep-sequencing data. Nucleic Acids Res. 2011 Jan;39(Database issue):D152-7. Epub
2010 Oct 30. PubMed PMID: 21037258
Griffiths-Jones S, Saini HK, van Dongen S, Enright AJ. miRBase: tools for
microRNA genomics. Nucleic Acids Res. 2008 Jan;36(Database issue):D154-8. Epub
2007 Nov 8. PubMed PMID: 17991681
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| 2011 | 66 |
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2 |
miRNA_Targetshttp://mamsap.it.deakin.edu.au/mirna_targets/. |
miRNA_Targets database provide researchers a query platform to investigate miRNA interactions in non-coding and coding regions of RNA and promote research activity on neglected 5? and coding regions of mRNA. |
| Kumar A, Wong AK, Tizard ML, Moore RJ, Lef\E8vre C.miRNA Targets:A database for miRNA target predictions in coding and non-coding regions of mRNAs.Genomics. 2012 Dec;100(6):352-6. doi: 10.1016/j.ygeno.2012.08.006. PMID: 22940442. |
| 2012 | 76 |
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3 |
miRDBhttp://mirdb.org |
Database on predicted microRNA targets and functional annotations of especially mature microRNA in animals. |
| Wang X. miRDB: a microRNA target prediction and functional annotation database
with a wiki interface. RNA. 2008 Jun;14(6):1012-7. Epub 2008 Apr 21. PubMed PMID:
18426918
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| 2008 | 97 |
Dataset downloadable Dataset downloadable |
4 |
APADBhttp://tools.genxpro.net/apadb/. |
| MFCller S, Rycak L, Afonso-Grunz F, Winter P, Zawada AM, Damrath E,Scheider J, Schm\E4h J, Koch I, Kahl G, Rotter B.APADB: A database for alternative polyadenylation and microRNA regulation events. Database (Oxford). 2014 Jul 22;2014. pii: bau076. doi: 10.1093/database/bau076. PMID: 25052703. |
| 2014 | 100 |
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5 |
EpimiRhttp://210.46.85.180:8080/EpimiR/ |
EpimiR provides a fairly comprehensive repository about the mutual regulation between epigenetic modifications and miRNAs, which will promote the research on the regulatory mechanism of epigenetics and miRNA |
| Dai E, Yu X, Zhang Y, Meng F, Wang S, Liu X, Liu D, Wang J, Li X, Jiang W.EpimiR: A database of curated mutual regulation between miRNAs and epigenetic modifications.Database (Oxford). 2014 Mar 28;2014:bau023. doi: 10.1093/database/bau023.PMID: 24682734 |
| 2014 | 100 |
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6 |
miRHrthttp://sysbio.suda.edu.cn/mirhrt/ |
Database of microRNA regulating heart development.
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| Liu G, Ding M, Chen J, Huang J, Wang H, Jing Q, Shen B. Computational analysis
of microRNA function in heart development. Acta Biochim Biophys Sin (Shanghai).
2010 Sep;42(9):662-70. Epub 2010 Aug 17. PubMed PMID: 20716610.
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| 2010 | 100 |
Dataset downloadable. On querying each section, no results were obtained and the following message was displayed:"Can't connect to MySQL server "(30-3-12, 7-4-12, 22-4-12, 24-4-12,29-6-12 , 18-7-12 ). "Dataset downloadable. On querying each section, no results were obtained and the following message was displayed:""Can't connect to MySQL server ""(30-3-12, 7-4-12, 22-4-12, 24-4-12,29-6-12 , 18-7-12 )." |
7 |
miRmap webhttp://mirmap.ezlab.org. |
| Vejnar CE, Blum M, Zdobnov EM.Comprehensive microRNA target prediction online.Nucleic Acids Res. 2013 Jul;41(Web Server issue):W165-8. doi: 10.1093/nar/gkt430.PMID: 23716633 |
| 2013 | 100 |
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8 |
miRNESThttp://mirnest.amu.edu.pl |
Comprehensive database on animal, plant and virus microRNA including details on species that are of importance in medical and agricultural research. |
| Szczesniak MW, Deorowicz S, Gapski J, Kaczynski L, Makalowska I. miRNEST database: an integrative approach in microRNA search and annotation. Nucleic Acids Res. 2012 Jan;40(Database issue):D198-204. Epub 2011 Dec 1. PubMed PMID: 22135287; PubMed Central PMCID: PMC3245016. |
| 2012 | 100 |
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9 |
miRSpongehttp://www.bio-bigdata.net/miRSponge |
miRSponge, a manually curated database, which aims at providing an experimentally supported resource for microRNA (miRNA) sponges. |
| Wang P, Zhi H, Zhang Y, Liu Y, Zhang J, Gao Y, Guo M, Ning S, Li X.miRSponge: a manually curated database for experimentally supported miRNA sponges and ceRNAs.Sci Rep. 2016 Mar 24;6:23700. doi: 10.1038/srep23700.PMID: 26424084. |
| 2016 | 100 |
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