| 1 |
LIQUIDhttp://github.com/PNNL-Comp-Mass-Spec/LIQUID. |
It is an open source software. Helps in processing and visualization of data LC-MS/MS-based lipidomics data | Jennifer E. Kyle Kevin L. Crowell Cameron P. Casey Grant M. Fujimoto Sangtae Kim Sydney E. Dautel Richard D. Smith Samuel H. Payne Thomas O. Metz; LIQUID: an-open source software for identifying lipids in LC-MS/MS-based lipidomics data; Bioinformatics. 2017 Jan 31. doi: 10.1093/bioinformatics/btx046; PMID: 28158427
| 2017 | 50 |
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| 2 |
Very large database of lipidshttp://www.clinicaltrials.gov |
Provides information about lipids | Elshazly MB, Quispe R, Michos ED, Sniderman AD, Toth PP, Banach M, Kulkarni KR, Coresh J, Blumenthal RS, Jones SR, Martin SS; Patient-Level Discordance in Population Percentiles of the Total Cholesterol to High-Density Lipoprotein Cholesterol Ratio in Comparison With Low-Density Lipoprotein Cholesterol and Non-High-Density Lipoprotein Cholesterol: The Very Large Database of Lipids Study (VLDL-2B);Circulation. 2015 Aug 25;132(8):667-76. doi: 10.1161/CIRCULATIONAHA.115.016163. Epub 2015 Jul 2; PMID: 25604238
| 2015 | 50 |
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| 3 |
Lipidomics Gatewayhttp://www.lipidmaps.org |
Provides detailed information about lipids as well as overview of developments in lipid research. | | Not available | 99 |
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| 4 |
LMSD - LIPID MAPS Structure Databasehttp://www.lipidmaps.org/ |
Provides information about the structure and annotations of biologically relevant lipids. | Sud M, Fahy E, Cotter D, Brown A, Dennis EA, Glass CK, Merrill AH Jr, Murphy RC, Raetz CR, Russell DW, Subramaniam S. LMSD: LIPID MAPS structure database. Nucleic Acids Res. 2007 Jan;35(Database issue):D527-32. Epub 2006 Nov 10. PubMed PMID: 17098933; PubMed Central PMCID: PMC1669719.
| 2007 | 99 |
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| 5 |
CYBERLIPID CENTERhttp://www.cyberlipid.org |
Provides description of different fats and oils. | | Not available | 100 |
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| 6 |
Lipid Bankhttp://lipidbank.jp |
Provides information about the natural lipids. | Yasugi E, Seyama Y. [Lipid database LipidBank and international collaboration]. Tanpakushitsu Kakusan Koso. 2007 Sep;52(11):1357-62. Review. Japanese. PubMed PMID: 17867291.
| 2007 | 100 |
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| 7 |
Lipid Bilayer Membranes for RasMolhttp://www.umass.edu/microbio/rasmol/bilayers.htm |
Provides lipid bilayer membrane information. | | Not available | 100 |
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| 8 |
LIPIDAGhttp://www.lipidag.tcd.ie |
Provides lipid miscibility and associated information | | Not available | 100 |
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| 9 |
LIPIDAThttp://www.lipidat.tcd.ie |
Provides information about the known mesomorphic and olymorphic phase transition temperatures and the enthalpy changes of the synthetic and biologically-derived lipids. | Caffrey M, Hogan J. LIPIDAT: a database of lipid phase transition temperatures and enthalpy changes. DMPC data subset analysis. Chem Phys Lipids. 1992 Mar;61(1):1-109. PubMed PMID: 1315624.
| 1992 | 100 |
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| 10 |
Lipids Onlinehttp://www.lipidsonline.org |
An online resource, which provides reliable information and educational tools like, slide library, virtual meetings, commentaries on research. | | Not available | 100 |
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| 11 |
LMPD - LIPID MAPS Proteome Databasehttp://www.lipidmaps.org/data/proteome/index.cgi |
Provides information about proteins and genes, which are associated with all the lipids and also provides the list of human proteins and mouse proteins. | Cotter D, Maer A, Guda C, Saunders B, Subramaniam S. LMPD: LIPID MAPS proteome database. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D507-10. PubMed PMID: 16381922; PubMed Central PMCID: PMC1347484.
| 2006 | 100 |
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| 12 |
LOX-DB - LipOXygenases DataBasehttp://www.glycosciences.de/spec/lox-db/ |
Provides information about the sequence, structure and function of mammalian members of lipoxygenases. | Lütteke T, Krieg P, Fürstenberger G, von der Lieth CW. LOX-DB-- database on lipoxygenases. Bioinformatics. 2003 Dec 12;19(18):2482-3. PubMed PMID: 14668238.
| 2003 | 100 |
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| 13 |
THE LIPID LIBRARYhttp://lipidlibrary.aocs.org |
Provides information about the lipids like, lipid chemistry, biology, technology & analysis. | | Not available | 100 |
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| 14 |
ANTISTAPHYBASE https://www.antistaphybase.com/ |
Provides information on antimicrobial peptides and essential oils. Freely available. | Abdelmajid ZouhirEmail authorMalek TaiebMohamed Ashraf LamineAmmar CherifTaoufik JridiBasma MahjoubiSarra MbarekIsmail FlissAdel NefziKhaled SebeiJeannette Ben Hamida; ANTISTAPHYBASE: database of antimicrobial peptides (AMPs) and essential oils (EOs) against methicillin-resistant Staphylococcus aureus (MRSA) and Staphylococcus aureus; Arch Microbiol. 2017 Mar;199(2):215-222. doi: 10.1007/s00203-016-1293-6. Epub 2016 Sep 26; PMID: 27671474
| 2017 | 100 |
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| 15 |
OGDD (Olive Genetic Diversity Database) http://www.bioinfo-cbs.org/ogdd/ |
Provides information about unknown olive or virgin olive oil cultivars based on their microsatellite allele size(s). Additional morphological and chemical information is also provided | Ben Ayed R, Ben Hassen H, Ennouri K, Ben Marzoug R, Rebai A; OGDD (Olive Genetic Diversity Database): a microsatellite markers' genotypes database of worldwide olive trees for cultivar identification and virgin olive oil traceability.Database (Oxford). 2016 Jan 30;2016. pii: bav090. doi: 10.1093/database/bav090; PMID: 26827236
| 2016 | 100 |
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| 16 |
ARALIPmutantDBhttp://aralip.plantbiology.msu.edu |
This database provides information about mutated Arabidopsis genes associated with Arabidopsis acyl lipid metabolism | McGlew K, Shaw V, Zhang M, Kim RJ, Yang W, Shorrosh B, Suh MC, Ohlrogge J. An annotated database of Arabidopsis mutants of acyl lipid metabolism.Plant Cell Rep. 2015 Apr;34(4):519-32. doi: 10.1007/s00299-014-1710-8. Epub 2014 Dec 10; PMID: 25487439
| 2015 | 100 |
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| 17 |
ocsESTdb http://ocri-genomics.org/ocsESTdb/ |
Provides expressed sequence tag (EST) information on seeds of large-scale oil crops like: sesame (Sesamum indicum), peanut (Arachis hypogaea), rapeseed (Brassica napus) and soybean (Glycine max) | Tao Ke, Jingyin Yu, Caihua Dong, Han Mao, Wei Hua, and Shengyi Liu; ocsESTdb: a database of oil crop seed EST sequences for comparative analysis and investigation of a global metabolic network and oil accumulation metabolism. BMC Plant Biol. 2015 Jan 21;15:19. doi: 10.1186/s12870-014-0399-8; PMID: 25604238
| 2015 | 100 |
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| 18 |
RaftProthttp://lipid-raft-database.di.uq.edu.au/ |
This database provides information about mammalian lipid raft-associated proteins | Shah A, Chen D, Boda AR, Foster LJ, Davis MJ, Hill MM; RaftProt: mammalian lipid raft proteome database; Nucleic Acids Res. 2015 Jan;43(Database issue):D335-8. doi: 10.1093/nar/gku1131. Epub 2014 Nov 11;PMID: 24623704
| 2015 | 100 |
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| 19 |
EssOilDBhttp://nipgr.res.in/Essoildb/ |
Database of plant essential oils | Kumari S, Pundhir S, Priya P, Jeena G, Punetha A, Chawla K, Firdos Jafaree Z1, Mondal S, Yadav G; EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom.; Database (Oxford). 2014 Dec 22;2014:bau120. doi: 10.1093/database/bau120; PMID: 25534749
| 2014 | 100 |
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| 20 |
LipidMinerhttp://sourceforge.net/projects/lipidminer/. |
It is a freely available software for the identifying and quantifying lipids automatically from multiple liquid chromatography-mass spectrometry data files. | Da Meng, Qibin Zhang,Xiaoli Gao, Si Wu, and Guang Lin. LipidMiner: a software for automated identification and quantification of lipids from multiple liquid chromatography-mass spectrometry data files. Rapid Commun Mass Spectrom. 2014 Apr 30;28(8):981-5. doi: 10.1002/rcm.6865. PMID: 24623704 PMCID: PMC4000603
| 2014 | 100 |
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| 21 |
LipidGOhttp://compbio.ddns.comp.nus.edu.sg/%7elipidgo/index.php |
This database gives information about lipid related gene ontology[GO] terms | Fan M, Low HS, Zhou H, Wenk MR, Wong L; LipidGO: database for lipid-related GO terms and applications. Bioinformatics. 2014 Apr 1;30(7):1043-4. doi: 10.1093/bioinformatics/btt689. Epub 2013 Dec 1; PMID: 24297518
| 2014 | 100 |
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| 22 |
LipidHomehttp://www.ebi.ac.uk/apweiler-srv/lipidhome |
This database provides information about theoritical lipid molecules. It is an equivalent resource of Uniprot in the field of lipidomics | Foster JM1, Moreno P, Fabregat A, Hermjakob H, Steinbeck C, Apweiler R, Wakelam MJ, Vizcaíno JA; LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics. PLoS One. 2013 May 7;8(5):e61951. doi: 10.1371/journal.pone.0061951; PMID: 23667450
| 2013 | 100 |
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| 23 |
In silico identification software (ISIS) http://omics.pnl.gov/ |
This algorithmin generates in silico spectra of lipids for the sole purpose of structural identification. | Kangas LJ, Metz TO, Isaac G, Schrom BT, Ginovska-Pangovska B, Wang L, Tan L, Lewis RR, Miller JH. In silico identification software (ISIS): a machine learning approach to tandem mass spectral identification of lipids. Bioinformatics. 2012 Jul 1;28(13):1705-13. doi: 10.1093/bioinformatics/bts194. Epub 2012 May 15; PMID: 22592377
| 2012 | 100 |
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| 24 |
ExoCarta http://www.exocarta.org |
It is a database of exosomal proteins, RNA and lipids | Suresh Mathivanan,1, Cassie J. Fahner, Gavin E. Reid, and Richard J. Simpson;ExoCarta 2012: database of exosomal proteins, RNA and lipids; Nucleic Acids Res. 2012 Jan;40(Database issue):D1241-4. doi: 10.1093/nar/gkr828. Epub 2011 Oct 11. PMID: 21989406
| 2012 | 100 |
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