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Categories of resources

Suggested Readings
 
Category-wise alphabetical list                                         All resources
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Total Resource - 303
A cSNP Map and Database for Human Chromosome 21
A-MADMAN - Annotation-based MicroArray DataMeta ANalysis tool
AANT - Amino Acid-Nucleotide Interaction Database
ABA - A-Bruijn Alignment
ABADV- Allen Brain Atlas-Driven Visualizations
ABLas software
ABS
Accelrys
Ace-it- Array CGH Expression integration tool
AceView
ActiTrack
ADAM
ADAPT II 
ADDPLAN
ADHESOMEFANetwork
ADME - Absorption, Distribution, Metabolism, Excretion databases (by UCSD)
admetSAR
AERD - Antibody/Epitope Registry database
AgAbDb - Antigen Antibody Interactions Database
AGD - Ashbya Genome Database
AGE - Alignment with Gap Excision
Agene
agReg-SNPdb
AHOD - Australian HIV Observational Database
Alamut software
ALEXA-seq
ALFRED
Ali Baba - PubMed as a Graph
AliComp - Alignments Comparison
AlignACE
ALLERGEN NOMENCLATURE
Alt Event Finder
Alt tox.org
Alternative Exon Database
Alternative Splicing Effects ASsessment Tools (AS-EAST)
AMADA
Amborella Genome Database
AMEN-Annotation, Mapping, Expression and Network
AMIGene - Annotation of MIcrobial Genes
AMPHORA
AncestrySNPminer
ANEXdb
Animal Genome Database
AnimalTFDB
Annotation-Modules
Antagomirbase
Antibodies Online
Antibody validation database
ANTIMIC - A Database of Antimicrobial Peptides Sequences
APA scan
AphidBase
ApiESTDB
Applied clinical trials online
Arabidopsis Co-Expression Tool (ACT)
AraCyc
ArboDraw
Argonaute database
ARNIE - AVEXIS Receptor Network with Integrated Expression
Array Studio
ArrayExpress
ArrayLeaRNA
ArrayOU
ArrayProspector
arraySCOUT
ArrayWiki
ARTS
AS-ALPS (alternative splicing-induced alteration of protein structure)
AS-Quant (Alternative Splicing Quantitation)
ASAP II - Alternative Splicing Annotation Project
ASDB
ASePCR
asg - Alternative Splicing Gallery
ASGS - Alternatively Splicing Graph server
ASimulatoR
ASlive
ASMD - Alternative Splicing Mutation Database
ASNEO DB
AspAlt
ASpedia-R
ASPIC
ASPicDB (Alternative Splicing Prediction Database)
ASPNs db
ASRP- Arabidopsis Small RNA Project Database
AssociationViewer
Astalavista - Alternative splicing transcriptional landscape visualization tool
Asterias
ASTRA - Alternative Splicing and TRanscription Archives
atBioNet
ATDB 2.0 - The Animal Toxin DataBase 2.0
Athamap colocalisation
ATHENA- Analysis Tool for Heritable and Environmental Network Associations
AtNAGNAG DB
AtPID - Arabidopsis thaliana Protein Interactome Database
atSNP
Attie Lab Diabetes Database
AUREA- Adaptive Unified Relative Expression Analyzer
AutoDock Vina
AutoSNPa
AVA - Array Visual Analyzer
Avian Genomes
AVISPA
A SNP resource and a genetic linkage map for Atlantic cod (Gadus morhua)
A4-Adaptive Automated Annotation
AB Large Indel Tool
ABAC database
abcam® - discover more
ABMapper
Abysis
Accurate
Aceprimer
acslXtreme
ACToR - Aggregated Computational Toxicology Resource
Adamant
ADDA - Automatic Domain Decomposition Algorithm
adegenet 1.3-1
ADiR - Assembler for Di-base Reads
ADME-AP - Absorption, Distribution, Metabolism, Excretion -Associated Protein
ADVICE - Automated Detection and Validation of Interaction by Co-Evolution
AffyMAPSDetector
AgBase
AgDB - Ashbya Genome Database
AGEMAP -Atlas of Gene Expression in Mouse Aging Project
aGeneApart
agReg-SNPdb-Plants
AIDA array
Alcovna - Algorithms for Comparing and Vizualizing Non Assembled data
ALEXA-Seq - ALternative EXpression Analysis
Algal Function Annotation tool
AliBaba
Align-m
AliGraf - Graphical Image of Alignment
ALLPATHS
Alt Event Finder tool
Alta Cyclic
Alternative Splicing Assembler (ASA)
Alternative Splicing Gallery (ASG)
Amadeus
AMDA - Automated Microarray Data Analysis
AMIA - Automated Microarray Image Analysis Toolbox for MATLAB
AMOS - A Modular Open Source whole genome assembler
AMPK signaling pathway
ANCHOR
angaGEDuCI
Animal Genome Size Database
AnimalTFDB - Animal Transcription Factor DataBase
AnnotationTools
Anti-cancer agent mechanism database
Antibody directory
Antibodypedia
ANTISTAPHYBASE
APADB
APID/APIN - Agile Protein Interaction DataAnalyzer
APIS
APPRIS
Arabidopsis MPSS
ARALIPmutantDB
ArchDB
ARMADA - Automated Robust Microarray Data Analysis
ARPIR software
Array-Pro Analyzer - Microarray analysis software for fast, accurate and repeatable results
ArrayExpressHTS
ArrayMiner - Powerful analysis tool for your microarray gene expression data
ArrayPipe
ArrayProspestor
ArrayTrack
ArrayXpath
ARTS - Alignment of RNA Tertiary Structures
AS-ALPS - Alternative Splicing Induced Alteration of Protein Structure
ASAP ( Alternative Splicing Annotation Project)
ASCancer Atlas DB
ASDB - Alternative Splicing Database
ASES tool
ASGAL (Alternative Splicing Graph ALigner)
ASHESdb
ASIP - Alternative Splicing in Plants
AsMamDB
ASmiR db
ASNP db
AspAlt tool
ASpediaFI DB
ASPic - Alternative Splicing Prediction
ASPicDB - Alterenative Splicing Prediction database
Asprofile
ASSESS - Analysis of Sample Set Enrichment Scores
ASSP
ASTD (Alternative Splicing Transcript Diversity)
ASTK
ASTRAL
AtCAST3
ATGCs - Alignable Tight Genomic Clusters
Athamap gene analysis
Atlas-Indel2
ATOME
AtPIN - Arabidopsis thaliana protein interaction network
ATTED-II
Augustus
Australian cancer trials
AutoPrime
AutoSNPdb
Avadis NGS
AVID - Annotation Via Integration of Data
Axeldb or Xenbase
A SNP resource for dissection of phenotypic and genetic variation in Pacific white shrimp (Litopenaeus vannamei)
AAIR
AB Small Indel Tool
ABACAS - Algorithm Based Automatic Contiguation of Assembled Sequences
AbDesigner
AbMiner
ABySS - Assembly By Short Sequences
ACCUSA
ACEScan
ACT - Arabidopsis Co-Expression Tool
AD-gene curated database
ADAN - Prediction of protein-protein interActions of moDular domAiNs
ADDock
ADGO
ADME - Absorption, Distribution, Metabolism, Excretion database (by aureus sciences)
ADMEDB by FUJITSU
aeGEPUCI
Affymate
AgBase - AgricultureBase database
AgdbNet - antigen sequence database
AgenDA - Alignment based Gene Detection Algorithm
AGILE - AliGnIng Long rEads
AHMII - Agent to Help Microbial Information Integration
AIR (Annotation Integrated Resource) tool
ALE-HAS
Alexa-Seq - Alternative Expression Analysis By RNA Sequencing
Algal Functional Annotation Tool
Alibee
Alignace
Allegro
ALOHOMORA
Alt Splice db
AltAnalyze
Alternative Splicing Detection Tool (ASDT)
AltTrans DB
aMAZE
AMEN - Annotation, Mapping, Expression and Network
AMIADA - Analysing MIcroArray Data
AMP - Automated Microarray Pipeline
Amplicon
Anchored DIALIGN
angaGEDUCI - Anopheles gambiae Gene Expression Database at UC Irvine
Animal-SNPAtlas
AnimalTFDB2
ANNOVAR
Antibiotic Kinetics©
Antibody Resource
AntiJen
ANZCTR - Australian New Zealand Clinical Trials Registry
APD2 - antimicrobial peptide database
APID2NET
APK© - Adult and Pediatric Kinetics
APPRIS database
Arabidopsis Reactome
AraNet - Probabilistic Functional Gene Network of Arabidopsis thaliana
Argonaute
aRNApipe tool
Array Designer
ArrayCluster
ArrayFox
ArrayMining - Online Microarray Data Mining
Arrayplot
ArrayQuest - An online DNA microarray analysis system
ArrayVision
ArrayXPath
ARUP Utah db
AS-CMC
ASAP II
ASD
ASE database
ASFinder
ASGS
AsiDesigner
ASIP(Alternative Splicing in Plants)
ASMD
ASmodeler
ASP (Alternatively Spliced Protein forms)
ASpedia
AspGD - Aspergillus Genome Database
ASPicDB
ASpli software
ASRG - ArabidopsisSplicing Related Genes
ASSIsT
ASTALAVISTA (alternative splicing transcriptional landscape visualization tool)
ASTER spectral library
ASTool
AStrap db
ATCC - American Type Culture Collection
AtGenExpress
Athena - Arabidopsis thaliana expression network analysis
Atlas-SNP2
AtPID
AtRTD3 (Arabidopsis thaliana Reference Transcript Database3)
ATTED-II - Arabidopsis thaliana trans-factor and cis-element prediction database
AuPosSOM
AutoDock
AutoPSI
AVA - Amplicon Variant Analyzer
AVATAR
AVIS - AJAX viewer of interactive signaling networks
AYB
 
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