| 1 |
Primacladehttp://dousta.umsl.edu/cgi-bin/primaclade.cgi |
| Conserved primer designing. |
| | Gadberry MD, Malcomber ST, Doust AN, Kellogg EA. Primaclade--a flexible tool to find conserved PCR primers across multiple species. Bioinformatics. 2005 Apr
1;21(7):1263-4. Epub 2004 Nov 11. PubMed PMID: 15539448. |
| 2005 | 100 |
Unable to use the vector of my choice as claimed by the author.
Unable to use the vector of my choice as claimed by the author. |
| 2 |
Primers4cladeshttp://maya.ccg.unam.mx/primers4clades/ http://floresta.eead.csic.es/primers4clades/ |
| 1. Designs PCR primers for cross-species amplification of novel sequencesA0from metagenomic DNA and from uncharacterized organisms belonging to user defined phylogenetic clades or taxa.
2. Useful for phylogenetic analysis. |
| | Contreras-Moreira B, Sachman-Ruiz B, Figueroa-Palacios I, Vinuesa P.
primers4clades: a web server that uses phylogenetic trees to design
lineage-specific PCR primers for metagenomic and diversity studies. Nucleic Acids
Res. 2009 Jul 1;37(Web Server issue):W95-W100. Epub 2009 May 21. PubMed PMID:
19465390. |
| 2009 | 100 |
Features are written as claimed by the author. Not validated completely.
Features are written as claimed by the author. Not validated completely. |
| 3 |
Primiquehttp://cgi-www.cs.au.dk/cgi-chili/primique/front.py |
| Designs primer pairs specific to the family of closely related species. |
| | Fredslund J, Lange M. Primique: automatic design of specific PCR primers for
each sequence in a family. BMC Bioinformatics. 2007 Oct 3;8:369. PubMed PMID:
17910777; PubMed Central PMCID: PMC2045118. |
| 2007 | 100 |
|
| 4 |
Primrosehttp://www.bioinformatics-toolkit.org/Primrose/index.html |
| Not available | Not available | 100 |
Not yet identified the unique feature of the tool. Features are written as claimed by the author. Refer "Feature Table" for the detail description of the tool.
"Not yet identified the unique feature of the tool. Features are written as claimed by the author. Refer ""Feature Table"" for the detail description of the tool." |
| 5 |
SeqStatehttp://bioinfweb.info/Software/SeqState |
| | MFCller K. SeqState: primer design and sequence statistics for phylogenetic DNA
datasets. Appl Bioinformatics. 2005;4(1):65-9. PubMed PMID: 16000015. |
| 2005 | 100 |
Not yet identified the unique feature of the tool. Features are written as claimed by the author. Refer "Feature Table" for the detail description of the tool.
"Not yet identified the unique feature of the tool. Features are written as claimed by the author. Refer ""Feature Table"" for the detail description of the tool." |
