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Categories of resources
Post-analysis categorization
Literature search
Post-survey categorization
Features validated in most cases
Gene expression
MicroRNA
Pathways
Primer designing
Protein-protein interactions (commonly used resources)
Protein structure prediction
SNP analysis
Features not validated
Alternative splice form analysis
DNA motif detection
Microbiology
Multiple sequence alignment
Next generation sequencing
Simple lists
Carbohydrates
Gene ID conversion
Lipids
Long non-coding RNA
piRNA
Promoter prediction
Protein-protein interactions (all resources)
RNA structure prediction
SNP analysis
Preliminary lists
Antibodies
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Cell lines
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DNA/RNA structures
Disease-gene relationships
Enzymes
Functional analysis
Gene Ontology specific analysis
Gene/protein unified information
Genetics
Genomes and Genomics
Mass spectrometry
Microarray data analysis
Molecular docking
Nomenclature
Organelles
Orthologs
Pharmacokinetics and Pharmacodynamics
Phylogeny/Taxonomy
Protein domains
Protein localization
Protein-nucleic acid interactions
Secretome
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Text-mining
Toxicology
Transcription factors and binding sites
Suggested Readings
Basic concepts
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Comparison of resources
Intuitive browsing
Multi-level categories
Alphabetical list
Created on: 06-Dec-2010
Last updated on: 10-Apr-2012
How to cite this?
A compilation and categorization of next-generation sequencing resources
Allaka Jyoshna, Santhi Ramachandran and Shoba Podapati (Correspondence: Acharya KK, kshitish@ibab.ac.in)
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Please use the following to cite:
"Allaka Jyoshna, Santhi Ramachandran and Shoba Podapati (Correspondence: Acharya KK, kshitish@ibab.ac.in), A compilation and categorization of next-generation sequencing resources; In: Startbioinfo; 6 Dec 2010, /NGS/"
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copyright © Dr. Kshitish Acharya K; all rights reserved
