| 1 | NeuroDNet
http://bioschool.iitd.ac.in/NeuroDNet/ | | A free to use resource for analyzing and constructing gene-networks for neurodegenerative diseases |
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| 2 | CAESAR
http://visionlab.bio.unc.edu/caesar/ | | Ranking genes as candidate genes for a complex trait using ontologies |
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| 3 | Oncomine
https://www.oncomine.org | | Gene expression patterns for several cancers |
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| 4 | S2G - Syndrome to Gene
http://fohs.bgu.ac.il/s2g | | A resource to find candidate gene for new and known syndromes, phenotypes, and related genes for a given set of genes |
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| 5 | DGP - Disease Gene Prediction
http://www.cgg.ebi.ac.uk/services/dgp | | Indication of involvement of genes in hereditary diseases using conservation, phylogenetic extent, protein length and paralogy patterns |
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URL not working as on 17 Jan 2014 (confirmed on 3 Nov 2016) |
| 6 | NCG - Network of Cancer Genes
http://bio.ieo.eu/ncg | | A resource to analyze genes in relation to cancer, and to find out their duplicability, orthology, miRNA targets and network properties |
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| 7 | HuGE Navigator - A Navigator for Human Genome Epidemiology
http://www.hugenavigator.net | | A searchable knowledgebase with many integrated applications such as gene-disease associations, genetic markers, genotype prevalence and publication trends |
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| 8 | POCUS - Prioritization Of Candidate genes Using Statistics
http://homepages.ed.ac.uk/csemple/pocus | | Prediction of disease genes by over-representation of shared identifiers, and functional annotation |
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| 9 | PolySearch
http://wishart.biology.ualberta.ca/polysearch | | A text-mining tool for identifying associations among queries including diseases |
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| 10 | ProDiGe - Prioritization of disease genes
http://cbio.ensmp.fr/~jvert/svn/prodige/html | | Disease gene prioritization and functional annotation: disease associations, gene expression, protein-interactions, domains, transcriptional motifs and literature |
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| 11 | CancerResource
http://bioinf-data.charite.de/cancerresource | | Functional annotation focused on cancer: GO, pathways, gene expression, drugs, protein-interactions, structures, etc. |
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| 12 | GeneRanker
http://cbioc.eas.asu.edu/generanker | | Identify and annotate gene-disease relationships by mining the biomedical literature |
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| 13 | GeneWanderer
http://compbio.charite.de/genewanderer | | Identify probable disease/phenotype candidate genes on a chromosomal location by combining disease relationships and protein-interactions |
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| 14 | GenTrepid
http://www.gentrepid.org | | Gene prioritization based on pathways and disease relationships, including protein-interactions, domains and structures |
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| 15 | iCTNet - integrated Complex Traits Network
http://flux.cs.queensu.ca/ictnet | | Functional association networks: DNA/protein-interactions, pathways, diseases, drug-targets, gene-tissue, etc. |
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| 16 | PGMapper - Phenotype genotype mapper
http://www.genediscovery.org/pgmapper | | Matching genes to phenotypes |
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| 17 | PhenoPred
http://www.phenopred.org | | Identify novel gene-disease associations in humans |
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