agReg-SNPdb | Tool name | agReg-SNPdb |
|---|
| URL | https://azifi.tz.agrar.uni-goettingen.de/agreg-snpdb/ |
|---|
| Important features | Provides information about the regulatory SNPs of seven agriculturally important animal species - cattle, pig, chicken, sheep, horse, goat and dog. Catalogs a total of 10,623,512 rSNPs from the animal species. |
|---|
| Citations | Klees S, Heinrich F, Schmitt AO, Gültas M. agReg-SNPdb: A Database of Regulatory SNPs for Agricultural Animal Species. Biology (Basel). 2021 Aug 17;10(8):790. doi: 10.3390/biology10080790. PMID: 34440019; PMCID: PMC8389679. |
|---|
| Year of publication | 2021 |
|---|
| Rank by usage frequency | 100 |
|---|
| Comments | Online |
|---|
| Function | |
|---|
| Category | |
|---|
| Applicable Species: Others | Applicable Species: Others |
|---|
| Application-based | Application-based |
|---|
| NGS-data centric (sequencing info/analysis of NGS data) | |
|---|
| Detection/ discovery/ identification | |
|---|
| Functional effect | Functional effect |
|---|
| Disease information | |
|---|
| Population-specific information | |
|---|
| Evolution-based information | |
|---|
| General analysis/visualization/annotation of SNPs | General analysis/visualization/annotation of SNPs |
|---|
| URL | https://azifi.tz.agrar.uni-goettingen.de/agreg-snpdb/ |
|---|
| Important features | Provides information about the regulatory SNPs of seven agriculturally important animal species - cattle, pig, chicken, sheep, horse, goat and dog. Catalogs a total of 10,623,512 rSNPs from the animal species. |
|---|
| Citations | Klees S, Heinrich F, Schmitt AO, Gültas M. agReg-SNPdb: A Database of Regulatory SNPs for Agricultural Animal Species. Biology (Basel). 2021 Aug 17;10(8):790. doi: 10.3390/biology10080790. PMID: 34440019; PMCID: PMC8389679. |
|---|
| Year of publication | 2021 |
|---|
| Rank by usage frequency | 100 |
|---|
| Comments | Online |
|---|
| Online | Online |
|---|
| Downloadable | |
|---|
| Online/Downloadable | |
|---|
| |
