RepTar | Tool name | RepTar |
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| URL | http://reptar.ekmd.huji.ac.il |
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| Important features | Database on genome-wide computed details of human and mouse microRNAs as well as of cellular targets of human and mouse viral microRNAs. |
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| Citations | Elefant N, Berger A, Shein H, Hofree M, Margalit H, Altuvia Y. RepTar: a
database of predicted cellular targets of host and viral miRNAs. Nucleic Acids
Res. 2011 Jan;39(Database issue):D188-94. Epub 2010 Dec 10. PubMed PMID:
21149264 |
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| Year of publication | 2010 |
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| Rank by usage frequency | 100 |
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| Comments | Dataset downloadable |
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| Function | SPECIES: human, SPECIES: mouse, SPECIES: virus, http://reptar.ekmd.huji.ac.il, Database on genome-wide computed details of human and mouse microRNAs as well as of cellular targets of human and mouse viral microRNAs. , Elefant N- Berger A- Shein H- Hofree M- Margalit H- Altuvia Y. RepTar: a
database of predicted cellular targets of host and viral miRNAs. Nucleic Acids
Res. 2011 Jan;39(Database issue):D188-94. Epub 2010 Dec 10. PubMed PMID:
21149264, 2010, 100, Dataset downloadable, Online, I. SPECIES SUPPORTED INCLUDE: human- mouse- virus II. QUERY OR INPUT DATA: 1. . Choose species (gene source)- miRNA source 2.Enter microRNA names or upload file.3. Enter gene (gene symbol / RefSeq accession- Gene names) - Other parameters. 2. Browse:Human miRNAs- EBV miRNAs- HCMV miRNA- KSHV miRNAs- Mouse miRNAs- MCMV miRNAs- MGHV miRNAs
III. OUTPUT DATA: details of target predictions depending on the type of analysis chosen. |
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