| Tool name | AutoPrime |
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| URL | http://www.autoprime.de/AutoPrimeWeb |
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| Important features | 1. Designs RT-PCR primers.
2. Allows the user to design primers to the exon-exon border sequence. |
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| Citations | Gunnar Wrobel1, Felix Kokocinski, and Peter Lichter.
AutoPrime: selecting primers for expressed sequences.
Genome Biology 2004. |
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| Year of publication | 2004 |
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| Rank by usage frequency | 100 |
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| Comments | Did not give results when tested [as per 5th july, 2011]. |
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| Function | Junction primers |
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| Category | Online, Free |
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| Features | 1. Autoprime takes ensembl genome browser data only.
2. It refers to the mispriming library, repbase.
3. Allows the user to design primers specific to mRNA sequence and non-specific to genomic DNA sequence.
4. It is based on primer 3 software. |
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| Description | For methylation pattern study of CpG island; eventually understanding the gene expression pattern. |
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