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A comparative account of microRNA resources, feature-validations and application-based categorizations

mirKO

Tool namemirKO
URLhttp://www.knockoutmouse.org/martsearch
Important featuresMouse microRNA knockout resource is a collection of mutant embryonic stem cells harboring specific deletions for most of the microRNA genes reposited in miRBase.
CitationsProsser HM, Koike-Yusa H, Cooper JD, Law FC, Bradley A. A resource of vectors and ES cells for targeted deletion of microRNAs in mice. Nat Biotechnol. 2011 Aug 7;29(9):840-5. doi: 10.1038/nbt.1929. PubMed PMID: 21822254; PubMed Central PMCID: PMC3242032.
Year of publication2011
Rank by usage frequency100
Comments
FunctionEXPERIMENTAL data analysis, SPECIES: mouse, http://www.knockoutmouse.org/martsearch, Mouse microRNA knockout resource is a collection of mutant embryonic stem cells harboring specific deletions for most of the microRNA genes reposited in miRBase., Prosser HM- Koike-Yusa H- Cooper JD- Law FC- Bradley A. A resource of vectors and ES cells for targeted deletion of microRNAs in mice. Nat Biotechnol. 2011 Aug 7;29(9):840-5. doi: 10.1038/nbt.1929. PubMed PMID: 21822254; PubMed Central PMCID: PMC3242032. , 2011, 100, I. SPECIES SUPPORTED INCLUDE: mouse II. QUERY OR INPUT DATA: 1. Search by gene- product identifiers- gene/ marker symbol or name- synonym- MGI accession ID- Ensemble geneID- Vega Gene ID- Entrez gene ID- CCDS ID- OMIM ID- Confirmed Positive Phenotype Test Name or any desired key word. III. OUTPUT DATA: details on selected gene- IKMC vectors and ES cells- details of ES cell clones (cassette type- deletion alleles)- details of targeting vector (design- cassette- backbone etc)- availability and ordering information. IV. ADDITIONAL INFORMATION: details on mirKO can be obtained from the ES cell repository such as International knockout mouse consortium.
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