microRNAbodymap | Tool name | microRNAbodymap |
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| URL | http://www.mirnabodymap.org/ |
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| Important features | Integrated database for functional analysis of microRNA in health and disease states. |
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| Citations | Mestdagh P, Lefever S, Pattyn F, Ridzon D, Fredlund E, Fieuw A, Ongenaert M,
Vermeulen J, De Paepe A, Wong L, Speleman F, Chen C, Vandesompele J. The microRNA
body map: dissecting microRNA function through integrative genomics. Nucleic
Acids Res. 2011 Nov 1;39(20):e136. Epub 2011 Aug 10. PubMed PMID: 21835775;
PubMed Central PMCID: PMC3203610.
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| Year of publication | 2011 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | FUNCTIONAL ANALYSIS: regulation/ expression, DISEASE/ TISSUE SPECIFIC, SPECIES: human, http://www.mirnabodymap.org/, Integrated database for functional analysis of microRNA in health and disease states., Mestdagh P- Lefever S- Pattyn F- Ridzon D- Fredlund E- Fieuw A- Ongenaert M-
Vermeulen J- De Paepe A- Wong L- Speleman F- Chen C- Vandesompele J. The microRNA
body map: dissecting microRNA function through integrative genomics. Nucleic
Acids Res. 2011 Nov 1;39(20):e136. Epub 2011 Aug 10. PubMed PMID: 21835775;
PubMed Central PMCID: PMC3203610.
, 2011, 100, Online, I. SPECIES SUPPORTED INCLUDE: Human- Mus musculus- Rattus norvegicus II. QUERY OR INPUT DATA: 1. Expression analysis (select organism- dataset- type of analysis) 2. miRNA2function (select microRNA- function)- 3. function2miRNA (enter or upload gene set)- 4. Pubmed search (enter microRNA- keyword of interest) III. OUTPUT DATA: Visualization of miRNA expression profiles with respect to sample- pathway or microRNA. Other results related to functional annotation- genes regulated by microRNA- pathways- Pubmed abstracts related to the given microRNA etc. |
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