microPIR | Tool name | microPIR |
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| URL | http://www4a.biotec.or.th/micropir/ |
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| Important features | Web based resource on promoter regions regulated by microRNAs in Homo sapiens. |
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| Citations | Piriyapongsa J, Bootchai C, Ngamphiw C, Tongsima S. microPIR: An Integrated
Database of MicroRNA Target Sites within Human Promoter Sequences. PLoS One.
2012;7(3):e33888. Epub 2012 Mar 16. PubMed PMID: 22439011; PubMed Central PMCID:
PMC3306312.
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| Year of publication | 2012 |
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| Rank by usage frequency | 100 |
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| Comments | Only registered users can access the downloadable files. |
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| Function | FUNCTIONAL ANALYSIS: promoter region/ transcription factor, SPECIES: human, http://www4a.biotec.or.th/micropir/, Web based resource on promoter regions regulated by microRNAs in Homo sapiens., Piriyapongsa J- Bootchai C- Ngamphiw C- Tongsima S. microPIR: An Integrated
Database of MicroRNA Target Sites within Human Promoter Sequences. PLoS One.
2012;7(3):e33888. Epub 2012 Mar 16. PubMed PMID: 22439011; PubMed Central PMCID:
PMC3306312.
, 2012, 100, Only registered users can access the downloadable files., Online, I. SPECIES SUPPORTED INCLUDE: human II. QUERY OR INPUT DATA: 1. Two search options- basic and advanced: a. Basic Search - search by target gene or related microRNA and target site parameters (default setting) b. Advanced Search - permits diverse query types and allows adjusting parameter setting- e.g. distance from transcription start site- sequence conservation level- binding parameters of microRNA- target promoter- and the overlap of target sites with other annotated genomic sequences. 3. OUTPUT DATA: details of microRNA target sites within human promoter regions. Genome browser: displays an integrated view of target sites and related genomic features. |
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