MISIM | Tool name | MISIM |
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| URL | http://cmbi.bjmu.edu.cn/misim |
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| Important features | Computational tool for measuring microRNA functional similarity for a given microRNA list and generating a microRNA functional network in the context of microRNA related diseases. |
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| Citations | Wang D, Wang J, Lu M, Song F, Cui Q. Inferring the human microRNA functional
similarity and functional network based on microRNA-associated diseases.
Bioinformatics. 2010 Jul 1;26(13):1644-50. Epub 2010 May 3. PubMed PMID:
20439255.
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| Year of publication | 2010 |
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| Rank by usage frequency | 100 |
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| Comments | Dataset downloadable |
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| Function | FUNCTIONAL ANALYSIS: regulation/ expression, DISEASE/ TISSUE SPECIFIC, http://cmbi.bjmu.edu.cn/misim, Computational tool for measuring microRNA functional similarity for a given microRNA list and generating a microRNA functional network in the context of microRNA related diseases. , Wang D- Wang J- Lu M- Song F- Cui Q. Inferring the human microRNA functional
similarity and functional network based on microRNA-associated diseases.
Bioinformatics. 2010 Jul 1;26(13):1644-50. Epub 2010 May 3. PubMed PMID:
20439255.
, 2010, 100, Dataset downloadable, Online, I. QUERY OR INPUT DATA: 1. Input list of microRNAs in the text area. Following which those microRNAS which are found to be associated with at least one disease will be identified. Please note that more than one identified microRNAs are essential for the tool to initiate calculation 2. Choose required threshold for network reconstruction II. OUTPUT DATA: analysis result comprising of pairwise functional similarity of the given set of microRNAs arranged in descending order. |
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