Home   |  About Startbioinfo |   Other web-portals | BdataA  | 

Categories of resources

Suggested Readings
 
 
A compilation and categorization of alternative splicing resources

ProSAS

Tool nameProSAS
URLhttp://services.bio.ifi.lmu.de/ProSAS/
Important features
CitationsBirzele F, KFCffner R, Meier F, Oefinger F, Potthast C, Zimmer R. ProSAS: a database for analyzing alternative splicing in the context of protein structures. Nucleic AcIDs Res. 2008 Jan;36(Database issue):D63-8. Epub 2007 Oct 11. PubMed PMID: 17933774; PubMed Central PMCID: PMC2238869.
Year of publication2008
Rank by usage frequency100
Comments1) Gene information includes chromosome number and strand information. 2) Returning database error as on 28th july 2012
FunctionGene Information, Finds alternative splicing in human, Finds alternative splicing in rat, Finds alternative splicing in mouse
Category
Input file formatEnsembl gene ID/ensembl transcript IDs, gene descriptions, uniprot gene names, gene matching patterns, swiss-prot/uniprot IDs, affyetrix probeset IDs.
Output file format
Limitation

copyright © BdataA; all rights reserved